Journal: Plant and Soil

Article Title: Molecular dynamics in germinating, endophyte-colonized quinoa seeds

doi: 10.1007/s11104-017-3184-2

Figure Lengend Snippet: Putative elicitors, antimicrobial and biofilm compounds in quinoa endophytes . a Alignment and phylogenetic relations of amino acid sequences from quinoa endophytes with flagellin sequences from B. amyloliquefaciens, B. subtilis, B. cereus , and pathogenic bacteria ( Pseudomonas syringae ). Flg22, a commonly used elicitor peptide, is included in the alignment. Accession numbers: B.amyl_DSM7: WP_013353776.1, B.amyl_FZB42: ABS75581.1, B.cereus: AAZ22698.1, B.subt_168: CAB15553.1, B.subt_9011: BAB58972.1, P.syringae: WP_046719188.1. b Alignment of bacillomycinD synthetase (partial) sequences from Bacillus strains exhibiting antifungal and biofilm-forming activities with putative homologs from quinoa endophytic bacteria. c Alignment of the induced systemic resistance (ISR)-triggering elicitor PeBA1 from B. amyloliquefaciens with (partial sequences of) putative homologs from quinoa endophytic bacteria, deduced from sequenced PCR products of three independent strains. Positions differentiating from the PeBA1 sequence are highlighted

Article Snippet: Endophyte colony material was used as PCR template for amplification with primers for the hag1 gene (flagellin) (Asano et al. ); BmyD (Xu et al. ); PeBA1 (Wang et al. ) , gyrA (Reva et al. ).

Techniques: Bacteria, Sequencing